STRINGSTRING
PFL_4485 PFL_4485 PFL_4484 PFL_4484 flgK flgK flgA flgA flgL flgL flgJ flgJ fliS fliS flgD flgD flgB flgB flgC flgC fliD fliD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Textmining
[Homology]
Score
PFL_4485Identified by match to protein family HMM PF05130. (155 aa)    
Predicted Functional Partners:
PFL_4484
Anti-sigma-28 factor, FlgM; Identified by match to protein family HMM PF04316.
  
  
 0.967
flgK
Flagellar hook-associated protein FlgK; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR02492; Belongs to the flagella basal body rod proteins family.
  
 
 0.965
flgA
Flagella basal body P-ring formation protein FlgA; Identified by similarity to SP:P40131; match to protein family HMM PF08666; match to protein family HMM TIGR03170.
  
  
 0.909
flgL
Flagellar hook-associated protein 3; Identified by match to protein family HMM PF00669; match to protein family HMM TIGR02550.
  
 
 0.898
flgJ
Flagellar rod assembly protein/muramidase FlgJ; Identified by match to protein family HMM PF01832; match to protein family HMM TIGR02541.
  
  
 0.885
fliS
Flagellar protein FliS; Identified by similarity to GB:AAT42123.1; match to protein family HMM PF02561; match to protein family HMM TIGR00208.
  
  
 0.871
flgD
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
  
  
 0.869
flgB
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
  
  
 0.869
flgC
Flagellar basal-body rod protein FlgC; Identified by match to protein family HMM PF00460; match to protein family HMM PF06429; match to protein family HMM TIGR01395; Belongs to the flagella basal body rod proteins family.
  
  
 0.862
fliD
Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.
  
  
 0.858
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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