STRINGSTRING
PFL_4510 PFL_4510 astE astE astB astB astD astD astA-4 astA-4 astA-5 astA-5 argD-2 argD-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
PFL_4510Conserved hypothetical protein. (95 aa)    
Predicted Functional Partners:
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
  
    0.857
astB
Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
  
    0.739
astD
Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
  
    0.600
astA-4
Arginine N-succinyltransferase, beta subunit; Identified by similarity to SP:P76218; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244.
  
    0.530
astA-5
Arginine N-succinyltransferase, alpha subunit; Identified by similarity to SP:P80357; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03245.
  
    0.464
argD-2
Acetylornithine/succinyldiaminopimelate aminotransferase; Identified by similarity to SP:Q885K0; match to protein family HMM PF00202; match to protein family HMM TIGR00707; match to protein family HMM TIGR03246; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
  
    0.404
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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