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astB astB astA-4 astA-4 astA-5 astA-5 astA astA astA-2 astA-2 astA-3 astA-3 astE astE astD astD argD-2 argD-2 PFL_2741 PFL_2741 PFL_4510 PFL_4510
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
astBSuccinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). (448 aa)    
Predicted Functional Partners:
astA-4
Arginine N-succinyltransferase, beta subunit; Identified by similarity to SP:P76218; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244.
 
 
 0.995
astA-5
Arginine N-succinyltransferase, alpha subunit; Identified by similarity to SP:P80357; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03245.
 
 
 0.994
astA
Arginine N-succinyltransferase, beta subunit; Identified by similarity to SP:P80358; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244.
 
 
 0.991
astA-2
Arginine N-succinyltransferase, alpha subunit; Identified by similarity to SP:P80357; match to protein family HMM PF04958; match to protein family HMM TIGR03243.
 
 
 0.991
astA-3
Arginine N-succinyltransferase; Identified by similarity to SP:P76218; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244.
 
 
 0.991
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
 
  
 0.982
astD
Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.
 
  
 0.969
argD-2
Acetylornithine/succinyldiaminopimelate aminotransferase; Identified by similarity to SP:Q885K0; match to protein family HMM PF00202; match to protein family HMM TIGR00707; match to protein family HMM TIGR03246; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 
 0.967
PFL_2741
NAD-glutamate dehydrogenase; Identified by match to protein family HMM PF05088.
 
    0.775
PFL_4510
Conserved hypothetical protein.
  
    0.739
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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