astA-4 protein (Pseudomonas protegens) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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gene neighborhood

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Score

astA-4

Arginine N-succinyltransferase, beta subunit; Identified by similarity to SP:P76218; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244. (342 aa)

Predicted Functional Partners:

astB

0.995

astD

0.976

PFL_3293

0.922

astE

0.920

speA

0.900

aruH

0.900

PFL_3354

0.900

PFL_5024

0.900

arcA

0.810

argH

0.807

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_3293	PFL_3354	PFL_3293	PFL_3354	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	0.903
PFL_3293	PFL_5024	PFL_3293	PFL_5024	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	0.903
PFL_3293	arcA	PFL_3293	PFL_4635	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	Arginine deiminase; Identified by similarity to GB:CAA04682.1; match to protein family HMM PF02274; match to protein family HMM TIGR01078.	0.851
PFL_3293	argH	PFL_3293	PFL_6004	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	Argininosuccinate lyase; Identified by similarity to SP:P50987; match to protein family HMM PF00206; match to protein family HMM TIGR00838.	0.831
PFL_3293	aruH	PFL_3293	PFL_2715	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	Arginine/pyruvate transaminase AruH; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01212.	0.903
PFL_3293	astA-4	PFL_3293	PFL_4513	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	Arginine N-succinyltransferase, beta subunit; Identified by similarity to SP:P76218; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244.	0.922
PFL_3293	speA	PFL_3293	PFL_0679	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	Arginine 2-monooxygenase; Catalyzes the biosynthesis of agmatine from arginine.	0.921
PFL_3354	PFL_3293	PFL_3354	PFL_3293	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	0.903
PFL_3354	PFL_5024	PFL_3354	PFL_5024	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	0.905
PFL_3354	arcA	PFL_3354	PFL_4635	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	Arginine deiminase; Identified by similarity to GB:CAA04682.1; match to protein family HMM PF02274; match to protein family HMM TIGR01078.	0.812
PFL_3354	argH	PFL_3354	PFL_6004	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	Argininosuccinate lyase; Identified by similarity to SP:P50987; match to protein family HMM PF00206; match to protein family HMM TIGR00838.	0.842
PFL_3354	aruH	PFL_3354	PFL_2715	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	Arginine/pyruvate transaminase AruH; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01212.	0.901
PFL_3354	astA-4	PFL_3354	PFL_4513	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	Arginine N-succinyltransferase, beta subunit; Identified by similarity to SP:P76218; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244.	0.900
PFL_3354	speA	PFL_3354	PFL_0679	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	Arginine 2-monooxygenase; Catalyzes the biosynthesis of agmatine from arginine.	0.904
PFL_5024	PFL_3293	PFL_5024	PFL_3293	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	Identified by similarity to SP:P28629; match to protein family HMM PF01276; match to protein family HMM PF03709; match to protein family HMM PF03711.	0.903
PFL_5024	PFL_3354	PFL_5024	PFL_3354	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	Putative aspartate aminotransferase; Identified by match to protein family HMM PF00155.	0.905
PFL_5024	arcA	PFL_5024	PFL_4635	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	Arginine deiminase; Identified by similarity to GB:CAA04682.1; match to protein family HMM PF02274; match to protein family HMM TIGR01078.	0.812
PFL_5024	argH	PFL_5024	PFL_6004	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	Argininosuccinate lyase; Identified by similarity to SP:P50987; match to protein family HMM PF00206; match to protein family HMM TIGR00838.	0.841
PFL_5024	aruH	PFL_5024	PFL_2715	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	Arginine/pyruvate transaminase AruH; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01212.	0.905
PFL_5024	astA-4	PFL_5024	PFL_4513	Putative arginine/pyruvate transaminase; Identified by similarity to GB:AAG08361.1; match to protein family HMM PF00155; match to protein family HMM PF01053; match to protein family HMM PF01212.	Arginine N-succinyltransferase, beta subunit; Identified by similarity to SP:P76218; match to protein family HMM PF04958; match to protein family HMM TIGR03243; match to protein family HMM TIGR03244.	0.900

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