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gltI gltI gltJ gltJ gltL gltL gltK gltK hisJ hisJ PFL_4875 PFL_4875 ansB ansB glpM glpM glpD glpD PFL_0247 PFL_0247 queD queD
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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[Homology]
Score
gltIGlutamate/aspartate ABC transporter, periplasmic glutamate/aspartate-binding protein GltI; Identified by similarity to SP:P37902; match to protein family HMM PF00497. (304 aa)    
Predicted Functional Partners:
gltJ
Glutamate/aspartate ABC transporter, permease protein GltJ; Identified by similarity to SP:P0AER3; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.995
gltL
Glutamate/aspartate ABC transporter, ATP-binding protein GltL; Identified by similarity to SP:P0AAG3; match to protein family HMM PF00005.
 0.992
gltK
Glutamate/aspartate ABC transporter, permease protein GltK; Identified by similarity to SP:P0AER5; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 0.988
hisJ
Histidine ABC transporter, periplasmic histidine-binding protein HisJ; Identified by similarity to SP:P0AEU0; match to protein family HMM PF00497; Belongs to the bacterial solute-binding protein 3 family.
  
   
 0.555
PFL_4875
Sensor histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF02518.
 
   
 0.515
ansB
Glutamin-(asparagin-)ase; Identified by similarity to SP:P10172; match to protein family HMM PF00710; match to protein family HMM TIGR00520; Belongs to the asparaginase 1 family.
 
  
 0.488
glpM
Membrane protein GlpM; Identified by similarity to SP:P52112; match to protein family HMM PF06942.
 
     0.460
glpD
Glycerol-3-phosphate dehydrogenase; Identified by similarity to SP:P13035; match to protein family HMM PF01266; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.458
PFL_0247
Polar amino acid ABC transporter, permease protein; Identified by similarity to SP:P0AFT4; match to protein family HMM PF00528; match to protein family HMM TIGR01726.
 
 
 0.439
queD
Queuosine biosynthesis protein QueD; Identified by match to protein family HMM PF01242; match to protein family HMM TIGR03367.
      
 0.435
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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