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PFL_4994 PFL_4994 PFL_0320 PFL_0320 PFL_0997 PFL_0997 PFL_6016 PFL_6016 ribF ribF ribE-2 ribE-2 hpaC hpaC msuE msuE ssuE ssuE PFL_4993 PFL_4993 nadK nadK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFL_4994Putative acid phosphatase; Identified by similarity to GB:BAA84942.1; match to protein family HMM PF01569. (237 aa)    
Predicted Functional Partners:
PFL_0320
Putative acid phosphatase; Identified by similarity to GB:BAA84942.1; match to protein family HMM PF01569.
  
  
 
0.925
PFL_0997
Putative acid phosphatase; Identified by similarity to SP:P28581; match to protein family HMM PF01569.
  
  
 
0.925
PFL_6016
HAD-superfamily hydrolase, subfamily IA, variant 1 and 3; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549.
    
 0.905
ribF
Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family.
    
  0.901
ribE-2
Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187.
    
  0.901
hpaC
4-hydroxyphenylacetate 3-monooxygenase, reductase component; Identified by similarity to SP:Q57501; match to protein family HMM PF01613; match to protein family HMM TIGR02296.
     
 0.900
msuE
NADH-dependent FMN reductase; Identified by similarity to SP:O31038; match to protein family HMM PF03358; match to protein family HMM TIGR03566.
     
  0.900
ssuE
NADH-dependent FMN reductase; Identified by similarity to SP:O85762; match to protein family HMM PF02525; match to protein family HMM PF03358; match to protein family HMM TIGR03567.
     
  0.900
PFL_4993
Outer membrane porin, OprD family; Identified by similarity to SP:P32722; match to protein family HMM PF03573.
       0.596
nadK
NAD(+)/NADH kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
     
 0.511
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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