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cyoC_2 cyoC_2 cyoA_2 cyoA_2 cyoD_2 cyoD_2 cyoB_2 cyoB_2 ctaC ctaC cyoE_1 cyoE_1 cyoA_1 cyoA_1 cyoB_1 cyoB_1 cyoD_1 cyoD_1 ctaD ctaD nuoD nuoD
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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[Homology]
Score
cyoC_2Cytochrome o ubiquinol oxidase, subunit III; Identified by similarity to SP:P18402; match to protein family HMM PF00510; match to protein family HMM TIGR02842. (208 aa)    
Predicted Functional Partners:
cyoA_2
Cytochrome o ubiquinol oxidase, subunit II; Identified by similarity to SP:P18400; match to protein family HMM PF00116; match to protein family HMM PF06481; match to protein family HMM TIGR01433.
 
 0.994
cyoD_2
Cytochrome o ubiquinol oxidase, subunit IV; Identified by similarity to SP:P18403; match to protein family HMM PF03626; match to protein family HMM TIGR02847.
 
 
 0.993
cyoB_2
Cytochrome o ubiquinol oxidase, subunit I; Identified by similarity to SP:P18401; match to protein family HMM PF00115; match to protein family HMM TIGR02843; Belongs to the heme-copper respiratory oxidase family.
 0.993
ctaC
Cytochrome c oxidase, subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
 
 0.988
cyoE_1
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
 
  
 0.981
cyoA_1
Cytochrome o ubiquinol oxidase, subunit II; Identified by similarity to SP:P18400; match to protein family HMM PF00116; match to protein family HMM PF06481; match to protein family HMM TIGR01433.
 
 0.976
cyoB_1
Cytochrome o ubiquinol oxidase, subunit I; Identified by similarity to SP:P18401; match to protein family HMM PF00115; match to protein family HMM TIGR02843; Belongs to the heme-copper respiratory oxidase family.
 0.970
cyoD_1
Cytochrome o ubiquinol oxidase, subunit IV; Identified by similarity to SP:P18403; match to protein family HMM PF03626; match to protein family HMM TIGR02847.
 
 
 0.967
ctaD
Cytochrome c oxidase, subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
 0.945
nuoD
NADH-quinone oxidoreductase, C/D subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the N-terminal section; belongs to the complex I 30 kDa subunit family.
   
 
 0.926
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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