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czcA czcA czcB czcB czcC czcC PFL_2557 PFL_2557 czcR czcR PFL_2508 PFL_2508 mexE mexE PFL_0237 PFL_0237 PFL_0710 PFL_0710 PFL_1157 PFL_1157 PFL_0236 PFL_0236
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
czcACobalt/zinc/cadmium resistance protein CzcA; Identified by similarity to SP:P13511; match to protein family HMM PF00873; match to protein family HMM TIGR00914; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1045 aa)    
Predicted Functional Partners:
czcB
Cobalt/zinc/cadmium resistance protein CzcB; Identified by similarity to SP:P13510; match to protein family HMM PF00529; match to protein family HMM TIGR01730; contains internal deletion; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.985
czcC
Cobalt/zinc/cadmium resistance protein CzcC; Identified by similarity to SP:P13509; match to protein family HMM PF02321.
 
  
 0.918
PFL_2557
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.690
czcR
Putative DNA-binding heavy metal response regulator; Identified by similarity to SP:O31395; similarity to GB:CAB56468.1; match to protein family HMM PF00072; match to protein family HMM PF00486; match to protein family HMM TIGR01387.
     
 0.624
PFL_2508
Cation efflux protein; Identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297.
 
   
 0.596
mexE
Multidrug efflux RND transporter, membrane fusion protein MexE; Identified by similarity to GB:CAA67866.1; match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.587
PFL_0237
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.564
PFL_0710
Copper-exporting ATPase; Identified by similarity to SP:P73241; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
     
 0.563
PFL_1157
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.561
PFL_0236
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.559
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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