Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| PFL_5330 | PFL_5332 | PFL_5330 | PFL_5332 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Conserved hypothetical protein. | 0.470 |
| PFL_5330 | phnA | PFL_5330 | PFL_5331 | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | Putative alkylphosphonate utilization operon protein PhnA; Identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686. | 0.563 |
| PFL_5332 | PFL_5330 | PFL_5332 | PFL_5330 | Conserved hypothetical protein. | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.470 |
| PFL_5332 | phnA | PFL_5332 | PFL_5331 | Conserved hypothetical protein. | Putative alkylphosphonate utilization operon protein PhnA; Identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686. | 0.451 |
| phnA | PFL_5330 | PFL_5331 | PFL_5330 | Putative alkylphosphonate utilization operon protein PhnA; Identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686. | Polyprenyl synthetase; Identified by match to protein family HMM PF00348; Belongs to the FPP/GGPP synthase family. | 0.563 |
| phnA | PFL_5332 | PFL_5331 | PFL_5332 | Putative alkylphosphonate utilization operon protein PhnA; Identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686. | Conserved hypothetical protein. | 0.451 |
| phnA | putA | PFL_5331 | PFL_0495 | Putative alkylphosphonate utilization operon protein PhnA; Identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686. | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.439 |
| putA | phnA | PFL_0495 | PFL_5331 | Proline dehydrogenase/delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Putative alkylphosphonate utilization operon protein PhnA; Identified by match to protein family HMM PF03831; match to protein family HMM PF08274; match to protein family HMM TIGR00686. | 0.439 |