PFL_5416 protein (Pseudomonas protegens) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

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Score

PFL_5416

Identified by match to protein family HMM PF03372. (358 aa)

Predicted Functional Partners:

PFL_5874

0.706

PFL_5415

0.664

PFL_4904

0.641

PFL_3764

0.638

PFL_1661

0.626

PFL_0468

0.625

PFL_2828

0.622

pueB

0.615

PFL_0687

0.607

PFL_0686

0.591

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_0468	PFL_0686	PFL_0468	PFL_0686	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Conserved hypothetical protein.	0.696
PFL_0468	PFL_0687	PFL_0468	PFL_0687	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.691
PFL_0468	PFL_1661	PFL_0468	PFL_1661	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Conserved hypothetical protein.	0.698
PFL_0468	PFL_2828	PFL_0468	PFL_2828	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126.	0.696
PFL_0468	PFL_3764	PFL_0468	PFL_3764	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Phage head morphogenesis protein, SPP1 gp7 family; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641.	0.643
PFL_0468	PFL_4904	PFL_0468	PFL_4904	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Conserved hypothetical protein.	0.739
PFL_0468	PFL_5415	PFL_0468	PFL_5415	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Putative membrane protein; Identified by match to protein family HMM PF06790.	0.652
PFL_0468	PFL_5416	PFL_0468	PFL_5416	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Identified by match to protein family HMM PF03372.	0.625
PFL_0468	PFL_5874	PFL_0468	PFL_5874	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Conserved hypothetical protein.	0.769
PFL_0468	pueB	PFL_0468	PFL_3205	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	Identified by similarity to GB:ABM54446.1; match to protein family HMM PF00353; match to protein family HMM PF01764.	0.701
PFL_0686	PFL_0468	PFL_0686	PFL_0468	Conserved hypothetical protein.	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	0.696
PFL_0686	PFL_0687	PFL_0686	PFL_0687	Conserved hypothetical protein.	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	0.586
PFL_0686	PFL_1661	PFL_0686	PFL_1661	Conserved hypothetical protein.	Conserved hypothetical protein.	0.624
PFL_0686	PFL_2828	PFL_0686	PFL_2828	Conserved hypothetical protein.	Transcriptional regulator, LysR family; Identified by match to protein family HMM PF00126.	0.722
PFL_0686	PFL_3764	PFL_0686	PFL_3764	Conserved hypothetical protein.	Phage head morphogenesis protein, SPP1 gp7 family; Identified by match to protein family HMM PF04233; match to protein family HMM TIGR01641.	0.577
PFL_0686	PFL_4904	PFL_0686	PFL_4904	Conserved hypothetical protein.	Conserved hypothetical protein.	0.716
PFL_0686	PFL_5416	PFL_0686	PFL_5416	Conserved hypothetical protein.	Identified by match to protein family HMM PF03372.	0.591
PFL_0686	PFL_5874	PFL_0686	PFL_5874	Conserved hypothetical protein.	Conserved hypothetical protein.	0.727
PFL_0686	pueB	PFL_0686	PFL_3205	Conserved hypothetical protein.	Identified by similarity to GB:ABM54446.1; match to protein family HMM PF00353; match to protein family HMM PF01764.	0.655
PFL_0687	PFL_0468	PFL_0687	PFL_0468	Sensory box histidine kinase; Identified by match to protein family HMM PF00512; match to protein family HMM PF00989; match to protein family HMM PF02518; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229.	Transporter, CPA2 family; Identified by match to protein family HMM PF00999.	0.691

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