PFL_5443 protein (Pseudomonas protegens) - STRING interaction network

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PFL_5443

Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283. (440 aa)

Predicted Functional Partners:

PFL_5442

0.636

rlpA-2

0.525

holA

0.478

queF

0.459

PFL_2395

0.449

PFL_2466

0.433

lptE

0.429

PFL_6122

0.403

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_2395	PFL_5443	PFL_2395	PFL_5443	Conserved hypothetical protein; Identified by match to protein family HMM PF07486.	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	0.449
PFL_2466	PFL_5443	PFL_2466	PFL_5443	Identified by match to protein family HMM PF00857.	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	0.433
PFL_5442	PFL_5443	PFL_5442	PFL_5443	Conserved hypothetical protein; Identified by match to protein family HMM PF03889.	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	0.636
PFL_5442	holA	PFL_5442	PFL_5441	Conserved hypothetical protein; Identified by match to protein family HMM PF03889.	DNA polymerase III, delta subunit; Identified by similarity to SP:P28630; match to protein family HMM PF06144; match to protein family HMM TIGR01128.	0.578
PFL_5442	lptE	PFL_5442	PFL_5440	Conserved hypothetical protein; Identified by match to protein family HMM PF03889.	Lipoprotein, RplB family; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.	0.508
PFL_5443	PFL_2395	PFL_5443	PFL_2395	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	Conserved hypothetical protein; Identified by match to protein family HMM PF07486.	0.449
PFL_5443	PFL_2466	PFL_5443	PFL_2466	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	Identified by match to protein family HMM PF00857.	0.433
PFL_5443	PFL_5442	PFL_5443	PFL_5442	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	Conserved hypothetical protein; Identified by match to protein family HMM PF03889.	0.636
PFL_5443	PFL_6122	PFL_5443	PFL_6122	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family.	0.403
PFL_5443	holA	PFL_5443	PFL_5441	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	DNA polymerase III, delta subunit; Identified by similarity to SP:P28630; match to protein family HMM PF06144; match to protein family HMM TIGR01128.	0.478
PFL_5443	lptE	PFL_5443	PFL_5440	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	Lipoprotein, RplB family; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.	0.429
PFL_5443	queF	PFL_5443	PFL_1967	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	Queuine synthase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).	0.459
PFL_5443	rlpA-2	PFL_5443	PFL_5449	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	Lipoprotein, RlpA family; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.	0.525
PFL_6122	PFL_5443	PFL_6122	PFL_5443	Identified by match to protein family HMM PF01263; Belongs to the glucose-6-phosphate 1-epimerase family.	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	0.403
holA	PFL_5442	PFL_5441	PFL_5442	DNA polymerase III, delta subunit; Identified by similarity to SP:P28630; match to protein family HMM PF06144; match to protein family HMM TIGR01128.	Conserved hypothetical protein; Identified by match to protein family HMM PF03889.	0.578
holA	PFL_5443	PFL_5441	PFL_5443	DNA polymerase III, delta subunit; Identified by similarity to SP:P28630; match to protein family HMM PF06144; match to protein family HMM TIGR01128.	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	0.478
holA	lptE	PFL_5441	PFL_5440	DNA polymerase III, delta subunit; Identified by similarity to SP:P28630; match to protein family HMM PF06144; match to protein family HMM TIGR01128.	Lipoprotein, RplB family; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.	0.783
lptE	PFL_5442	PFL_5440	PFL_5442	Lipoprotein, RplB family; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.	Conserved hypothetical protein; Identified by match to protein family HMM PF03889.	0.508
lptE	PFL_5443	PFL_5440	PFL_5443	Lipoprotein, RplB family; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.	Lytic murein transglycosylase family protein; Identified by match to protein family HMM PF01471; match to protein family HMM TIGR02283.	0.429
lptE	holA	PFL_5440	PFL_5441	Lipoprotein, RplB family; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.	DNA polymerase III, delta subunit; Identified by similarity to SP:P28630; match to protein family HMM PF06144; match to protein family HMM TIGR01128.	0.783

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