choV protein (Pseudomonas protegens) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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Score

choV

Choline ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01186; match to protein family HMM TIGR03415. (392 aa)

Predicted Functional Partners:

choW

0.998

choX

0.992

hisW

0.990

PFL_0030

0.982

PFL_1710

0.982

PFL_2723

0.981

PFL_5752

0.981

PFL_2554

0.980

PFL_2603

0.970

hisX

0.968

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_0030	PFL_1710	PFL_0030	PFL_1710	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	0.689
PFL_0030	PFL_2554	PFL_0030	PFL_2554	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069.	0.483
PFL_0030	PFL_2603	PFL_0030	PFL_2603	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069.	0.559
PFL_0030	PFL_2723	PFL_0030	PFL_2723	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	Putative choline ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	0.413
PFL_0030	PFL_5752	PFL_0030	PFL_5752	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	0.415
PFL_0030	choV	PFL_0030	PFL_5764	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	Choline ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01186; match to protein family HMM TIGR03415.	0.982
PFL_0030	choW	PFL_0030	PFL_5763	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	Choline ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR03416.	0.988
PFL_0030	hisW	PFL_0030	PFL_0404	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	Histidine ABC transporter, permease protein; Identified by similarity to GB:AAF78098.1; match to protein family HMM PF00528.	0.985
PFL_0030	hisX	PFL_0030	PFL_0403	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	Histidine ABC transporter, periplasmic histidine-binding protein; Identified by similarity to GB:AAF78097.1; match to protein family HMM PF04069.	0.425
PFL_1710	PFL_0030	PFL_1710	PFL_0030	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	0.689
PFL_1710	PFL_2554	PFL_1710	PFL_2554	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069.	0.516
PFL_1710	PFL_2603	PFL_1710	PFL_2603	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069.	0.556
PFL_1710	PFL_2723	PFL_1710	PFL_2723	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	Putative choline ABC transporter, periplasmic binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	0.509
PFL_1710	PFL_5752	PFL_1710	PFL_5752	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	0.521
PFL_1710	choV	PFL_1710	PFL_5764	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	Choline ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01186; match to protein family HMM TIGR03415.	0.982
PFL_1710	choW	PFL_1710	PFL_5763	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	Choline ABC transporter, permease protein; Identified by match to protein family HMM PF00528; match to protein family HMM TIGR03416.	0.997
PFL_1710	choX	PFL_1710	PFL_5762	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	0.701
PFL_1710	hisW	PFL_1710	PFL_0404	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	Histidine ABC transporter, permease protein; Identified by similarity to GB:AAF78098.1; match to protein family HMM PF00528.	0.997
PFL_1710	hisX	PFL_1710	PFL_0403	ABC transporter, substrate-binding protein, QAT family; Identified by similarity to GB:AAK05549.1; match to protein family HMM PF04069.	Histidine ABC transporter, periplasmic histidine-binding protein; Identified by similarity to GB:AAF78097.1; match to protein family HMM PF04069.	0.671
PFL_2554	PFL_0030	PFL_2554	PFL_0030	ABC transporter, substrate-binding protein, QAT family; Identified by match to protein family HMM PF04069.	Choline ABC transporter, periplasmic choline-binding protein; Identified by match to protein family HMM PF04069; match to protein family HMM TIGR03414.	0.483

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