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mdcD mdcD mdcE mdcE mdcA mdcA mdcC mdcC mdcH mdcH mdcG mdcG mdcB mdcB accA accA madL madL madM madM oadA oadA
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Score
mdcDMalonate decarboxylase, beta subunit; Identified by match to protein family HMM TIGR03133. (283 aa)    
Predicted Functional Partners:
mdcE
Malonate decarboxylase, gamma subunit; Identified by similarity to GB:BAA36208.1; match to protein family HMM PF06833; match to protein family HMM TIGR03134.
 
 0.999
mdcA
Malonate decarboxylase, alpha subunit; Identified by match to protein family HMM TIGR01110.
 
 
 0.993
mdcC
Malonate decarboxylase acyl carrier protein; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.
 
  
 0.985
mdcH
Malonate decarboxylase, epsilon subunit; Identified by similarity to GB:BAA36210.1; match to protein family HMM PF00698; match to protein family HMM TIGR03131.
 
  
 0.971
mdcG
holo-ACP synthase, malonate decarboxylase-specific; Transfers 2'-(5-triphosphoribosyl)-3'-dephosphocoenzyme-A to the apo-[acyl-carrier-protein] of the malonate decarboxylase to yield holo-[acyl-carrier-protein]; Belongs to the MdcG family.
 
  
 0.967
mdcB
triphosphoribosyl-dephospho-CoA synthase; Involved in the formation of 2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A, the prosthetic group of the acyl-carrier protein of the malonate decarboxylase; Belongs to the CitG/MdcB family.
 
  
 0.962
accA
acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.
  
 
 0.926
madL
Malonate transporter, MadL subunit; Identified by similarity to GB:AAC45407.1; match to protein family HMM PF03817; match to protein family HMM TIGR00807.
 
    0.900
madM
Malonate transporter, MadM subunit; Identified by similarity to GB:AAC45408.1; match to protein family HMM PF03818; match to protein family HMM TIGR00808.
 
   
 0.883
oadA
Oxaloacetate decarboxylase alpha subunit; Identified by match to protein family HMM PF00364; match to protein family HMM PF00682; match to protein family HMM PF02436; match to protein family HMM TIGR01108.
  
 
 0.738
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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