PFL_5950 protein (Pseudomonas protegens) - STRING interaction network

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

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Score

PFL_5950

Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448. (105 aa)

Predicted Functional Partners:

PFL_5949

0.624

PFL_5948

0.614

PFL_0613

0.469

PFL_1145

0.465

PFL_4970

0.461

mucA

0.459

PFL_5947

0.409

Your Current Organism:

Pseudomonas protegens

NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PFL_0613	PFL_1145	PFL_0613	PFL_1145	Identified by match to protein family HMM PF00210; match to protein family HMM PF02915.	Conserved hypothetical protein.	0.634
PFL_0613	PFL_5950	PFL_0613	PFL_5950	Identified by match to protein family HMM PF00210; match to protein family HMM PF02915.	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	0.469
PFL_1145	PFL_0613	PFL_1145	PFL_0613	Conserved hypothetical protein.	Identified by match to protein family HMM PF00210; match to protein family HMM PF02915.	0.634
PFL_1145	PFL_5950	PFL_1145	PFL_5950	Conserved hypothetical protein.	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	0.465
PFL_4970	PFL_5950	PFL_4970	PFL_5950	Surface antigen protein, Rickettsia 17 kDa family; Identified by match to protein family HMM PF05433.	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	0.461
PFL_4970	mucA	PFL_4970	PFL_1449	Surface antigen protein, Rickettsia 17 kDa family; Identified by match to protein family HMM PF05433.	Sigma factor AlgU negative regulatory protein MucA; Identified by similarity to GB:AAK94007.1; match to protein family HMM PF03872; match to protein family HMM PF03873.	0.707
PFL_5947	PFL_5948	PFL_5947	PFL_5948	Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Identified by match to protein family HMM PF01145.	0.513
PFL_5947	PFL_5949	PFL_5947	PFL_5949	Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Identified by match to protein family HMM PF01957.	0.504
PFL_5947	PFL_5950	PFL_5947	PFL_5950	Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	0.409
PFL_5948	PFL_5947	PFL_5948	PFL_5947	Identified by match to protein family HMM PF01145.	Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.513
PFL_5948	PFL_5949	PFL_5948	PFL_5949	Identified by match to protein family HMM PF01145.	Identified by match to protein family HMM PF01957.	0.964
PFL_5948	PFL_5950	PFL_5948	PFL_5950	Identified by match to protein family HMM PF01145.	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	0.614
PFL_5949	PFL_5947	PFL_5949	PFL_5947	Identified by match to protein family HMM PF01957.	Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.504
PFL_5949	PFL_5948	PFL_5949	PFL_5948	Identified by match to protein family HMM PF01957.	Identified by match to protein family HMM PF01145.	0.964
PFL_5949	PFL_5950	PFL_5949	PFL_5950	Identified by match to protein family HMM PF01957.	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	0.624
PFL_5950	PFL_0613	PFL_5950	PFL_0613	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	Identified by match to protein family HMM PF00210; match to protein family HMM PF02915.	0.469
PFL_5950	PFL_1145	PFL_5950	PFL_1145	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	Conserved hypothetical protein.	0.465
PFL_5950	PFL_4970	PFL_5950	PFL_4970	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	Surface antigen protein, Rickettsia 17 kDa family; Identified by match to protein family HMM PF05433.	0.461
PFL_5950	PFL_5947	PFL_5950	PFL_5947	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	Methyl-accepting chemotaxis protein; Identified by match to protein family HMM PF00015; match to protein family HMM PF00672.	0.409
PFL_5950	PFL_5948	PFL_5950	PFL_5948	Conserved hypothetical protein; Identified by match to protein family HMM PF09498; match to protein family HMM TIGR02448.	Identified by match to protein family HMM PF01145.	0.614

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