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PFL_6016 PFL_6016 ribD_2 ribD_2 PFL_0997 PFL_0997 ribF ribF PFL_0320 PFL_0320 ribE-2 ribE-2 ribH ribH PFL_4994 PFL_4994 ribE ribE msuE msuE ssuE ssuE
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
PFL_6016HAD-superfamily hydrolase, subfamily IA, variant 1 and 3; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; match to protein family HMM TIGR01549. (234 aa)    
Predicted Functional Partners:
ribD_2
Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
    
 0.931
PFL_0997
Putative acid phosphatase; Identified by similarity to SP:P28581; match to protein family HMM PF01569.
 
  
 0.919
ribF
Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; Belongs to the ribF family.
  
 
 0.919
PFL_0320
Putative acid phosphatase; Identified by similarity to GB:BAA84942.1; match to protein family HMM PF01569.
 
  
 0.916
ribE-2
Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187.
   
 
 0.907
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.
     
 0.905
PFL_4994
Putative acid phosphatase; Identified by similarity to GB:BAA84942.1; match to protein family HMM PF01569.
    
 0.905
ribE
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.
     
 0.905
msuE
NADH-dependent FMN reductase; Identified by similarity to SP:O31038; match to protein family HMM PF03358; match to protein family HMM TIGR03566.
  
 
 0.903
ssuE
NADH-dependent FMN reductase; Identified by similarity to SP:O85762; match to protein family HMM PF02525; match to protein family HMM PF03358; match to protein family HMM TIGR03567.
  
 
 0.903
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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