STRINGSTRING
PFL_6165 PFL_6165 PFL_0975 PFL_0975 PFL_0533 PFL_0533 PFL_1749 PFL_1749 PFL_5238 PFL_5238 PFL_5089 PFL_5089 PFL_1768 PFL_1768 PFL_1280 PFL_1280 PFL_4017 PFL_4017 sulA sulA PFL_6006 PFL_6006
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFL_6165Conserved hypothetical protein; Identified by match to protein family HMM PF09346. (135 aa)    
Predicted Functional Partners:
PFL_0975
YebG family protein; Identified by similarity to SP:P0ACY9; match to protein family HMM PF07130.
  
     0.746
PFL_0533
FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
  
     0.722
PFL_1749
Conserved hypothetical protein.
  
     0.711
PFL_5238
Conserved hypothetical protein.
  
     0.704
PFL_5089
Conserved hypothetical protein; Identified by match to protein family HMM PF06295.
  
     0.692
PFL_1768
Conserved hypothetical protein.
  
     0.648
PFL_1280
Conserved hypothetical protein.
  
     0.619
PFL_4017
Peptidase propeptide and YpeB domain protein; Identified by match to protein family HMM PF03413.
  
     0.619
sulA
Cell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.
  
     0.560
PFL_6006
Conserved hypothetical protein.
  
     0.555
Your Current Organism:
Pseudomonas protegens
NCBI taxonomy Id: 220664
Other names: P. protegens Pf-5, Pseudomonas fluorescens Pf-5, Pseudomonas protegens Pf-5, Pseudomonas protegens str. Pf-5, Pseudomonas protegens strain Pf-5, Pseudomonas sp. Pf-5
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