Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| PFL_0107 | PFL_0550 | Conserved hypothetical protein. | HAMP domain protein; Identified by match to protein family HMM PF00672. | 0.654 |
| PFL_0107 | PFL_4290 | Conserved hypothetical protein. | CHAD domain protein; Identified by match to protein family HMM PF05235. | 0.702 |
| PFL_0107 | PFL_4327 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.633 |
| PFL_0107 | PFL_5286 | Conserved hypothetical protein. | Putative phospholipid-binding domain protein; Identified by match to protein family HMM PF04972. | 0.547 |
| PFL_0107 | PFL_6245 | Conserved hypothetical protein. | Putative lipoprotein. | 0.638 |
| PFL_0550 | PFL_0107 | HAMP domain protein; Identified by match to protein family HMM PF00672. | Conserved hypothetical protein. | 0.654 |
| PFL_0550 | PFL_4290 | HAMP domain protein; Identified by match to protein family HMM PF00672. | CHAD domain protein; Identified by match to protein family HMM PF05235. | 0.769 |
| PFL_0550 | PFL_4327 | HAMP domain protein; Identified by match to protein family HMM PF00672. | Conserved hypothetical protein. | 0.759 |
| PFL_0550 | PFL_6245 | HAMP domain protein; Identified by match to protein family HMM PF00672. | Putative lipoprotein. | 0.547 |
| PFL_0681 | PFL_6245 | Conserved hypothetical protein. | Putative lipoprotein. | 0.483 |
| PFL_1400 | PFL_6245 | Conserved hypothetical protein. | Putative lipoprotein. | 0.461 |
| PFL_3978 | PFL_5992 | Putative lipoprotein. | Conserved hypothetical protein. | 0.618 |
| PFL_3978 | PFL_6245 | Putative lipoprotein. | Putative lipoprotein. | 0.608 |
| PFL_4290 | PFL_0107 | CHAD domain protein; Identified by match to protein family HMM PF05235. | Conserved hypothetical protein. | 0.702 |
| PFL_4290 | PFL_0550 | CHAD domain protein; Identified by match to protein family HMM PF05235. | HAMP domain protein; Identified by match to protein family HMM PF00672. | 0.769 |
| PFL_4290 | PFL_4327 | CHAD domain protein; Identified by match to protein family HMM PF05235. | Conserved hypothetical protein. | 0.665 |
| PFL_4290 | PFL_6245 | CHAD domain protein; Identified by match to protein family HMM PF05235. | Putative lipoprotein. | 0.479 |
| PFL_4327 | PFL_0107 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.633 |
| PFL_4327 | PFL_0550 | Conserved hypothetical protein. | HAMP domain protein; Identified by match to protein family HMM PF00672. | 0.759 |
| PFL_4327 | PFL_4290 | Conserved hypothetical protein. | CHAD domain protein; Identified by match to protein family HMM PF05235. | 0.665 |
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