STRINGSTRING
PP_5240 PP_5240 PP_5241 PP_5241 PP_3552 PP_3552 PP_2354 PP_2354 PP_3835 PP_3835 PP_3413 PP_3413 PP_5242 PP_5242 PP_3430 PP_3430 PP_3833 PP_3833 PP_3412 PP_3412 PP_2100 PP_2100
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PP_5240Response regulator. (122 aa)    
Predicted Functional Partners:
PP_5241
DNA-binding response regulator, LuxR family.
 
  
0.825
PP_3552
Sensory box histidine kinase.
 
 
 0.784
PP_2354
Sensory box histidine kinase/response regulator.
 
 
 0.756
PP_3835
Sensory box histidine kinase.
 
 
 0.723
PP_3413
Sensor histidine kinase/response regulator.
 
 
 
 0.720
PP_5242
Sensor histidine kinase/GAF domain protein.
 
 
 0.715
PP_3430
Sensory box histidine kinase/response regulator.
 
 
 
 0.700
PP_3833
Response regulator.
  
   
 0.700
PP_3412
DNA-binding response regulator, LuxR family.
  
   
 0.685
PP_2100
Two-component sensor protein; Function of homologous gene experimentally demonstrated in an other organism; receptor.
 
 
 0.667
Your Current Organism:
Pseudomonas putida KT2440
NCBI taxonomy Id: 160488
Other names: P. putida KT2440, Pseudomonas putida (strain KT2440), Pseudomonas putida str. KT2440
Server load: low (26%) [HD]