STRINGSTRING
AEA67187.1 AEA67187.1 AEA67185.1 AEA67185.1 AEA67621.1 AEA67621.1 AEA67183.1 AEA67183.1 AEA67182.1 AEA67182.1 AEA67186.1 AEA67186.1 AEA67188.1 AEA67188.1 AEA69980.1 AEA69980.1 AEA70915.1 AEA70915.1 AEA68265.1 AEA68265.1 AEA69810.1 AEA69810.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67187.1Putative Transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family. (304 aa)    
Predicted Functional Partners:
AEA67185.1
Putative ABC transporter, periplasmic component; substrate-binding protein.
 
     0.768
AEA67621.1
Putative transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.685
AEA67183.1
Putative ABC transporter, permease component.
 
    0.641
AEA67182.1
Putative ABC transporter, permease component.
 
     0.615
AEA67186.1
Putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
     0.598
AEA67188.1
Conserved hypothetical protein.
       0.583
AEA69980.1
Putative Transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.571
AEA70915.1
Putative transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.557
AEA68265.1
Putative transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.546
AEA69810.1
Putative Transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.536
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
Server load: low (24%) [HD]