STRINGSTRING
AEA67198.1 AEA67198.1 AEA71230.1 AEA71230.1 minE minE AEA67174.1 AEA67174.1 AEA72012.1 AEA72012.1 AEA70639.1 AEA70639.1 AEA67962.1 AEA67962.1 PSEBR_a96 PSEBR_a96 AEA70711.1 AEA70711.1 lysS lysS AEA71158.1 AEA71158.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67198.1Putative Transcription factor, TetR family. (238 aa)    
Predicted Functional Partners:
AEA71230.1
Conserved hypothetical protein.
  
     0.753
minE
Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.
   
    0.749
AEA67174.1
Conserved hypothetical protein.
   
    0.748
AEA72012.1
Conserved hypothetical protein.
  
     0.692
AEA70639.1
Conserved hypothetical protein.
 
     0.655
AEA67962.1
Conserved hypothetical protein.
  
     0.652
PSEBR_a96
Conserved hypothetical protein.
  
     0.650
AEA70711.1
Putative DNA-binding protein.
  
     0.629
lysS
lysyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.600
AEA71158.1
Conserved hypothetical protein.
  
     0.590
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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