STRINGSTRING
AEA67276.1 AEA67276.1 AEA70174.1 AEA70174.1 AEA67297.1 AEA67297.1 AEA70173.1 AEA70173.1 AEA70171.1 AEA70171.1 AEA70168.1 AEA70168.1 AEA67275.1 AEA67275.1 AEA70172.1 AEA70172.1 AEA70167.1 AEA70167.1 AEA67277.1 AEA67277.1 bamB bamB
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67276.1Conserved hypothetical protein. (116 aa)    
Predicted Functional Partners:
AEA70174.1
Putative phage tail length tape measure protein.
  
  
 0.750
AEA67297.1
Conserved putative phage-related hypothetical protein; putative bacteriophage lysozyme.
  
    0.739
AEA70173.1
Putative phage minor tail protein.
   
    0.709
AEA70171.1
Putative phage minor tail protein.
   
    0.673
AEA70168.1
Putative phage tail assembly protein.
   
    0.670
AEA67275.1
Conserved hypothetical protein.
       0.620
AEA70172.1
Putative phage minor tail protein.
   
    0.562
AEA70167.1
Putative phage host specificity protein.
   
    0.485
AEA67277.1
Putative colicin M-like protein.
       0.432
bamB
Conserved hypothetical protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
  
 0.403
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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