node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66924.1 | AEA68105.1 | PSEBR_a762 | PSEBR_a1885 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | DNA-directed DNA polymerase (DNA polymerase II). | 0.401 |
AEA66924.1 | AEA68153.1 | PSEBR_a762 | PSEBR_a1930 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | ImuA protein. | 0.469 |
AEA66924.1 | PSEBR_a2 | PSEBR_a762 | PSEBR_a2 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.446 |
AEA66924.1 | dinB | PSEBR_a762 | PSEBR_a1140 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | DNA-directed DNA polymerase (DNA polymerase IV); Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.614 |
AEA66924.1 | lexA | PSEBR_a762 | PSEBR_a1753 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | Putative transcription factor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.689 |
AEA66924.1 | lexA-2 | PSEBR_a762 | PSEBR_a1929 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | Putative transcription factor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.689 |
AEA66924.1 | polA | PSEBR_a762 | PSEBR_a40 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.624 |
AEA66924.1 | recA | PSEBR_a762 | PSEBR_a1123 | DNA repair protein; May be involved in recombinational repair of damaged DNA. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.855 |
AEA68105.1 | AEA66924.1 | PSEBR_a1885 | PSEBR_a762 | DNA-directed DNA polymerase (DNA polymerase II). | DNA repair protein; May be involved in recombinational repair of damaged DNA. | 0.401 |
AEA68105.1 | AEA70445.1 | PSEBR_a1885 | PSEBR_a4045 | DNA-directed DNA polymerase (DNA polymerase II). | DNA polymerase III, subunit delta. | 0.907 |
AEA68105.1 | PSEBR_a2 | PSEBR_a1885 | PSEBR_a2 | DNA-directed DNA polymerase (DNA polymerase II). | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.978 |
AEA68105.1 | dinB | PSEBR_a1885 | PSEBR_a1140 | DNA-directed DNA polymerase (DNA polymerase II). | DNA-directed DNA polymerase (DNA polymerase IV); Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.886 |
AEA68105.1 | lexA | PSEBR_a1885 | PSEBR_a1753 | DNA-directed DNA polymerase (DNA polymerase II). | Putative transcription factor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.474 |
AEA68105.1 | polA | PSEBR_a1885 | PSEBR_a40 | DNA-directed DNA polymerase (DNA polymerase II). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.975 |
AEA68105.1 | recA | PSEBR_a1885 | PSEBR_a1123 | DNA-directed DNA polymerase (DNA polymerase II). | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.770 |
AEA68153.1 | AEA66924.1 | PSEBR_a1930 | PSEBR_a762 | ImuA protein. | DNA repair protein; May be involved in recombinational repair of damaged DNA. | 0.469 |
AEA68153.1 | dinB | PSEBR_a1930 | PSEBR_a1140 | ImuA protein. | DNA-directed DNA polymerase (DNA polymerase IV); Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | 0.872 |
AEA68153.1 | lexA | PSEBR_a1930 | PSEBR_a1753 | ImuA protein. | Putative transcription factor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.582 |
AEA68153.1 | lexA-2 | PSEBR_a1930 | PSEBR_a1929 | ImuA protein. | Putative transcription factor, LexA family; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.890 |
AEA70445.1 | AEA68105.1 | PSEBR_a4045 | PSEBR_a1885 | DNA polymerase III, subunit delta. | DNA-directed DNA polymerase (DNA polymerase II). | 0.907 |