STRINGSTRING
AEA67328.1 AEA67328.1 AEA67327.1 AEA67327.1 AEA67335.1 AEA67335.1 AEA67334.1 AEA67334.1 mutM mutM AEA69138.1 AEA69138.1 AEA69405.1 AEA69405.1 AEA67330.1 AEA67330.1 AEA67329.1 AEA67329.1 nnrD nnrD AEA67331.1 AEA67331.1
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AEA67328.1Putative ATP-dependent helicase, Lhr-like helicase. (828 aa)    
Predicted Functional Partners:
AEA67327.1
Conserved hypothetical protein; Putative metallophosphoesterase.
 
    0.958
AEA67335.1
Conserved hypothetical protein; putative mRNA 3\-end processing factor.
 
    0.843
AEA67334.1
Putative DNA ligase (ATP) (ATP-dependent DNA ligase).
 
    0.841
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
  
  
 0.595
AEA69138.1
Putative DNA ligase (ATP).
 
    0.580
AEA69405.1
Putative ATP-dependent DNA ligase.
 
    0.537
AEA67330.1
Putative amino acid ABC transporter, protein binding component.
       0.517
AEA67329.1
Amino acid ABC transporter, ATP-binding component.
       0.491
nnrD
Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair o [...]
  
  
 0.475
AEA67331.1
Histidine ABC transporter, permease protein component.
       0.440
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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