STRINGSTRING
AEA67342.1 AEA67342.1 tolB tolB AEA67341.1 AEA67341.1 AEA67344.1 AEA67344.1 AEA67343.1 AEA67343.1 AEA70657.1 AEA70657.1 AEA71820.1 AEA71820.1 rpsN rpsN rpsB rpsB rpsF rpsF AEA66833.1 AEA66833.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67342.1Conserved hypothetical protein; putative OmpA/MotB, putative OmpA family protein. (241 aa)    
Predicted Functional Partners:
tolB
Colicin import protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.647
AEA67341.1
Conserved hypothetical protein; putative outer membrane protein.
 
    
0.573
AEA67344.1
Conserved hypothetical protein.
       0.565
AEA67343.1
Conserved hypothetical protein.
       0.549
AEA70657.1
Putative lipoprotein.
 
 
 0.499
AEA71820.1
Conserved hypothetical protein.
 
 
 0.457
rpsN
30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.
   
 
 0.453
rpsB
30S ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.
   
 
 0.452
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.
  
   0.452
AEA66833.1
Conserved hypothetical protein.
   
 
 0.452
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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