Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66640.1 | AEA67347.1 | PSEBR_a495 | PSEBR_a1169 | Conserved hypothetical protein. | Esterase III. | 0.523 |
AEA66640.1 | AEA70619.1 | PSEBR_a495 | PSEBR_a4212 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.768 |
AEA66640.1 | AEA71103.1 | PSEBR_a495 | PSEBR_a4685 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.720 |
AEA67347.1 | AEA66640.1 | PSEBR_a1169 | PSEBR_a495 | Esterase III. | Conserved hypothetical protein. | 0.523 |
AEA67347.1 | AEA67348.1 | PSEBR_a1169 | PSEBR_a1170 | Esterase III. | Conserved hypothetical protein; putative outer membrane protein, putative OmpA family. | 0.522 |
AEA67347.1 | AEA68671.1 | PSEBR_a1169 | PSEBR_a2391 | Esterase III. | Putative peptide synthase. | 0.544 |
AEA67347.1 | AEA68674.1 | PSEBR_a1169 | PSEBR_a2394 | Esterase III. | Putative peptide synthase. | 0.473 |
AEA67347.1 | AEA70306.1 | PSEBR_a1169 | PSEBR_a3916 | Esterase III. | Pyoverdine synthetase. | 0.473 |
AEA67347.1 | AEA70313.1 | PSEBR_a1169 | PSEBR_a3922 | Esterase III. | Putative non-ribosomal peptide synthetase. | 0.427 |
AEA67347.1 | AEA70619.1 | PSEBR_a1169 | PSEBR_a4212 | Esterase III. | Conserved hypothetical protein. | 0.505 |
AEA67347.1 | AEA71103.1 | PSEBR_a1169 | PSEBR_a4685 | Esterase III. | Conserved hypothetical protein. | 0.535 |
AEA67347.1 | dinG | PSEBR_a1169 | PSEBR_a1168 | Esterase III. | Putative ATP-dependent helicase, ATP-dependent DNA helicase DinG domain protein; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.521 |
AEA67347.1 | pdxH | PSEBR_a1169 | PSEBR_a1171 | Esterase III. | Pyridoxal 5-phosphate synthase (pyridoxamine 5-phosphate oxidase); Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.469 |
AEA67348.1 | AEA67347.1 | PSEBR_a1170 | PSEBR_a1169 | Conserved hypothetical protein; putative outer membrane protein, putative OmpA family. | Esterase III. | 0.522 |
AEA67348.1 | pdxH | PSEBR_a1170 | PSEBR_a1171 | Conserved hypothetical protein; putative outer membrane protein, putative OmpA family. | Pyridoxal 5-phosphate synthase (pyridoxamine 5-phosphate oxidase); Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP). | 0.742 |
AEA68671.1 | AEA67347.1 | PSEBR_a2391 | PSEBR_a1169 | Putative peptide synthase. | Esterase III. | 0.544 |
AEA68671.1 | AEA68674.1 | PSEBR_a2391 | PSEBR_a2394 | Putative peptide synthase. | Putative peptide synthase. | 0.999 |
AEA68671.1 | AEA70306.1 | PSEBR_a2391 | PSEBR_a3916 | Putative peptide synthase. | Pyoverdine synthetase. | 0.999 |
AEA68671.1 | AEA70313.1 | PSEBR_a2391 | PSEBR_a3922 | Putative peptide synthase. | Putative non-ribosomal peptide synthetase. | 0.999 |
AEA68671.1 | dinG | PSEBR_a2391 | PSEBR_a1168 | Putative peptide synthase. | Putative ATP-dependent helicase, ATP-dependent DNA helicase DinG domain protein; DNA-dependent ATPase and 5'-3' DNA helicase. | 0.422 |
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