STRINGSTRING
AEA67372.1 AEA67372.1 AEA67371.1 AEA67371.1 AEA70501.1 AEA70501.1 AEA68817.1 AEA68817.1 AEA69994.1 AEA69994.1 AEA69392.1 AEA69392.1 AEA68267.1 AEA68267.1 AEA68671.1 AEA68671.1 AEA69025.1 AEA69025.1 AEA68674.1 AEA68674.1 AEA70306.1 AEA70306.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurrence
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[Homology]
Score
AEA67372.1Putative Transcription factor, AraC family. (297 aa)    
Predicted Functional Partners:
AEA67371.1
4-hydroxybenzoate 3-monooxygenase (p-hydroxybenzoate hydroxylase).
 
   
 0.792
AEA70501.1
Putative response regulator, YesN family.
 
     0.715
AEA68817.1
Putative Transcription factor, AraC family.
  
   0.653
AEA69994.1
Putative Transcription factor, AraC family.
  
   0.637
AEA69392.1
Putative Transcription factor, AraC family.
  
   0.600
AEA68267.1
Putative transcription factor, AraC family.
  
   0.588
AEA68671.1
Putative peptide synthase.
     
 0.572
AEA69025.1
Putative Transcriptional regulator, AraC family.
  
   0.567
AEA68674.1
Putative peptide synthase.
  
  
 0.566
AEA70306.1
Pyoverdine synthetase.
  
  
 0.566
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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