STRINGSTRING
AEA67432.1 AEA67432.1 AEA67433.1 AEA67433.1 AEA69206.1 AEA69206.1 AEA67431.1 AEA67431.1 AEA69343.1 AEA69343.1 AEA67434.1 AEA67434.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
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[Homology]
Score
AEA67432.1Amino acid transporter, LysE family. (195 aa)    
Predicted Functional Partners:
AEA67433.1
Putative Transcription factor, LysR family; Belongs to the LysR transcriptional regulatory family.
 
   
 0.932
AEA69206.1
Conserved hypothetical protein.
  
    0.734
AEA67431.1
Superoxide dismutase (Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.546
AEA69343.1
Conserved hypothetical protein.
  
    0.523
AEA67434.1
Putative dehydrogenase, putative 3-beta hydroxysteroid dehydrogenase/isomerase family protein.
       0.494
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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