Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66239.1 | AEA66241.1 | PSEBR_a107 | PSEBR_a109 | Putative asparaginase. | Aspartate ammonia-lyase. | 0.960 |
AEA66239.1 | AEA67526.1 | PSEBR_a107 | PSEBR_a1337 | Putative asparaginase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.915 |
AEA66239.1 | AEA68000.1 | PSEBR_a107 | PSEBR_a1787 | Putative asparaginase. | Putative bifunctional protein: aspartate racemase; glutamate racemase; Belongs to the aspartate/glutamate racemases family. | 0.913 |
AEA66239.1 | AEA68371.1 | PSEBR_a107 | PSEBR_a2109 | Putative asparaginase. | Putative asparaginase; Belongs to the asparaginase 1 family. | 0.912 |
AEA66239.1 | argG | PSEBR_a107 | PSEBR_a4390 | Putative asparaginase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.909 |
AEA66239.1 | purA | PSEBR_a107 | PSEBR_a546 | Putative asparaginase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.900 |
AEA66239.1 | pyrB | PSEBR_a107 | PSEBR_a5316 | Putative asparaginase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.901 |
AEA66241.1 | AEA66239.1 | PSEBR_a109 | PSEBR_a107 | Aspartate ammonia-lyase. | Putative asparaginase. | 0.960 |
AEA66241.1 | AEA67526.1 | PSEBR_a109 | PSEBR_a1337 | Aspartate ammonia-lyase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.928 |
AEA66241.1 | AEA68000.1 | PSEBR_a109 | PSEBR_a1787 | Aspartate ammonia-lyase. | Putative bifunctional protein: aspartate racemase; glutamate racemase; Belongs to the aspartate/glutamate racemases family. | 0.923 |
AEA66241.1 | AEA68371.1 | PSEBR_a109 | PSEBR_a2109 | Aspartate ammonia-lyase. | Putative asparaginase; Belongs to the asparaginase 1 family. | 0.949 |
AEA66241.1 | argG | PSEBR_a109 | PSEBR_a4390 | Aspartate ammonia-lyase. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily. | 0.833 |
AEA66241.1 | purA | PSEBR_a109 | PSEBR_a546 | Aspartate ammonia-lyase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.908 |
AEA66241.1 | pyrB | PSEBR_a109 | PSEBR_a5316 | Aspartate ammonia-lyase. | Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.900 |
AEA66948.1 | AEA67526.1 | PSEBR_a784 | PSEBR_a1337 | Nicotinate-nucleotide pyrophosphorylase domain protein; Belongs to the NadC/ModD family. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.997 |
AEA66948.1 | nadA | PSEBR_a784 | PSEBR_a4425 | Nicotinate-nucleotide pyrophosphorylase domain protein; Belongs to the NadC/ModD family. | Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily. | 0.997 |
AEA67111.1 | AEA67526.1 | PSEBR_a942 | PSEBR_a1337 | Putative hydrolase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.911 |
AEA67526.1 | AEA66239.1 | PSEBR_a1337 | PSEBR_a107 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Putative asparaginase. | 0.915 |
AEA67526.1 | AEA66241.1 | PSEBR_a1337 | PSEBR_a109 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Aspartate ammonia-lyase. | 0.928 |
AEA67526.1 | AEA66948.1 | PSEBR_a1337 | PSEBR_a784 | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | Nicotinate-nucleotide pyrophosphorylase domain protein; Belongs to the NadC/ModD family. | 0.997 |
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