Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA66491.1 | AEA67531.1 | PSEBR_a350 | PSEBR_a1342 | Putative peptidase. | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.439 |
| AEA66491.1 | AEA71179.1 | PSEBR_a350 | PSEBR_a4760 | Putative peptidase. | Conserved hypothetical protein. | 0.508 |
| AEA67021.1 | AEA67531.1 | PSEBR_a855 | PSEBR_a1342 | Putative ABC transporter, permease component. | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.542 |
| AEA67021.1 | AEA67537.1 | PSEBR_a855 | PSEBR_a1348 | Putative ABC transporter, permease component. | Putative lipoprotein. | 0.651 |
| AEA67021.1 | AEA71179.1 | PSEBR_a855 | PSEBR_a4760 | Putative ABC transporter, permease component. | Conserved hypothetical protein. | 0.501 |
| AEA67021.1 | bamA | PSEBR_a855 | PSEBR_a1073 | Putative ABC transporter, permease component. | Putative surface antigen family outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.441 |
| AEA67021.1 | lptD | PSEBR_a855 | PSEBR_a5135 | Putative ABC transporter, permease component. | Putative organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.782 |
| AEA67531.1 | AEA66491.1 | PSEBR_a1342 | PSEBR_a350 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative peptidase. | 0.439 |
| AEA67531.1 | AEA67021.1 | PSEBR_a1342 | PSEBR_a855 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative ABC transporter, permease component. | 0.542 |
| AEA67531.1 | AEA67532.1 | PSEBR_a1342 | PSEBR_a1343 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family. | 0.619 |
| AEA67531.1 | AEA67533.1 | PSEBR_a1342 | PSEBR_a1344 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative permease protein. | 0.565 |
| AEA67531.1 | AEA67537.1 | PSEBR_a1342 | PSEBR_a1348 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative lipoprotein. | 0.511 |
| AEA67531.1 | AEA67714.1 | PSEBR_a1342 | PSEBR_a1518 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Cytochrome c-type biogenesis protein. | 0.457 |
| AEA67531.1 | AEA71179.1 | PSEBR_a1342 | PSEBR_a4760 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Conserved hypothetical protein. | 0.462 |
| AEA67531.1 | bamA | PSEBR_a1342 | PSEBR_a1073 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative surface antigen family outer membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.533 |
| AEA67531.1 | bamA-2 | PSEBR_a1342 | PSEBR_a3657 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Surface antigen protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.485 |
| AEA67531.1 | lptD | PSEBR_a1342 | PSEBR_a5135 | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | Putative organic solvent tolerance protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. | 0.585 |
| AEA67532.1 | AEA67531.1 | PSEBR_a1343 | PSEBR_a1342 | Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family. | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.619 |
| AEA67532.1 | AEA67533.1 | PSEBR_a1343 | PSEBR_a1344 | Conserved hypothetical protein; Belongs to the sulfur carrier protein TusA family. | Putative permease protein. | 0.791 |
| AEA67533.1 | AEA67531.1 | PSEBR_a1344 | PSEBR_a1342 | Putative permease protein. | Putative peptidase; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state. | 0.565 |
page 1 of 3