STRINGSTRING
AEA67535.1 AEA67535.1 AEA67534.1 AEA67534.1 lptC lptC PSEBR_a44 PSEBR_a44 zipA zipA AEA67537.1 AEA67537.1 gcvP gcvP AEA70077.1 AEA70077.1 AEA70665.1 AEA70665.1 AEA71945.1 AEA71945.1 AEA71216.1 AEA71216.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
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Experiments
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[Homology]
Score
AEA67535.1Conserved hypothetical protein. (186 aa)    
Predicted Functional Partners:
AEA67534.1
Putative bacterioferritin comigratory protein.
  
    0.855
lptC
Conserved hypothetical protein, putative exported membrane protein; Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. Facilitates the transfer of LPS from the inner membrane to the periplasmic protein LptA. Could be a docking site for LptA.
  
     0.637
PSEBR_a44
Putative endonuclease/exonuclease/phosphatase.
  
     0.627
zipA
Putative cell division protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.608
AEA67537.1
Putative lipoprotein.
 
    0.606
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
  
 0.601
AEA70077.1
Conserved hypothetical protein.
  
     0.580
AEA70665.1
Conserved hypothetical protein.
  
     0.576
AEA71945.1
Conserved hypothetical protein; Belongs to the UPF0149 family.
  
     0.573
AEA71216.1
Conserved hypothetical protein; putative lipoprotein.
  
     0.566
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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