STRINGSTRING
AEA67554.1 AEA67554.1 AEA69406.1 AEA69406.1 AEA67584.1 AEA67584.1 AEA67555.1 AEA67555.1 AEA67557.1 AEA67557.1 AEA67553.1 AEA67553.1 AEA71394.1 AEA71394.1 AEA68687.1 AEA68687.1 AEA68097.1 AEA68097.1 AEA66857.1 AEA66857.1 rnd rnd
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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[Homology]
Score
AEA67554.1Putative transmembrane sulfatase. (549 aa)    
Predicted Functional Partners:
AEA69406.1
Putative Peptide-aspartate beta-dioxygenase.
     
 0.905
AEA67584.1
Putative Peptide-aspartate beta-dioxygenase.
     
 0.904
AEA67555.1
Conserved hypothetical protein.
     
 0.505
AEA67557.1
Conserved hypothetical protein.
 
     0.480
AEA67553.1
Putative glutamine synthetase.
       0.464
AEA71394.1
Conserved hypothetical protein.
     
 0.444
AEA68687.1
Flagellar basal-body rod protein.
    
 
 0.442
AEA68097.1
Conserved hypothetical protein; putative lipoprotein.
  
     0.409
AEA66857.1
Conserved hypothetical protein.
 
   
 0.402
rnd
Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.
       0.401
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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