Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA66996.1 | AEA67558.1 | PSEBR_a830 | PSEBR_a1368 | Conserved hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Putative dehydrogenase. | 0.548 |
| AEA66996.1 | AEA68671.1 | PSEBR_a830 | PSEBR_a2391 | Conserved hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | Putative peptide synthase. | 0.438 |
| AEA67032.1 | AEA67558.1 | PSEBR_a866 | PSEBR_a1368 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative dehydrogenase. | 0.657 |
| AEA67032.1 | AEA68672.1 | PSEBR_a866 | PSEBR_a2392 | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Putative peptide synthase. | 0.415 |
| AEA67169.1 | AEA67558.1 | PSEBR_a996 | PSEBR_a1368 | Homoserine dehydrogenase. | Putative dehydrogenase. | 0.664 |
| AEA67169.1 | AEA68672.1 | PSEBR_a996 | PSEBR_a2392 | Homoserine dehydrogenase. | Putative peptide synthase. | 0.418 |
| AEA67169.1 | serC | PSEBR_a996 | PSEBR_a1549 | Homoserine dehydrogenase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.720 |
| AEA67557.1 | AEA67558.1 | PSEBR_a1367 | PSEBR_a1368 | Conserved hypothetical protein. | Putative dehydrogenase. | 0.554 |
| AEA67557.1 | rnd | PSEBR_a1367 | PSEBR_a1366 | Conserved hypothetical protein. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.919 |
| AEA67558.1 | AEA66996.1 | PSEBR_a1368 | PSEBR_a830 | Putative dehydrogenase. | Conserved hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.548 |
| AEA67558.1 | AEA67032.1 | PSEBR_a1368 | PSEBR_a866 | Putative dehydrogenase. | Putative glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.657 |
| AEA67558.1 | AEA67169.1 | PSEBR_a1368 | PSEBR_a996 | Putative dehydrogenase. | Homoserine dehydrogenase. | 0.664 |
| AEA67558.1 | AEA67557.1 | PSEBR_a1368 | PSEBR_a1367 | Putative dehydrogenase. | Conserved hypothetical protein. | 0.554 |
| AEA67558.1 | AEA68671.1 | PSEBR_a1368 | PSEBR_a2391 | Putative dehydrogenase. | Putative peptide synthase. | 0.567 |
| AEA67558.1 | AEA68672.1 | PSEBR_a1368 | PSEBR_a2392 | Putative dehydrogenase. | Putative peptide synthase. | 0.508 |
| AEA67558.1 | AEA70671.1 | PSEBR_a1368 | PSEBR_a4262 | Putative dehydrogenase. | Putative D-lactate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.481 |
| AEA67558.1 | rnd | PSEBR_a1368 | PSEBR_a1366 | Putative dehydrogenase. | Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family. | 0.560 |
| AEA67558.1 | rplF | PSEBR_a1368 | PSEBR_cmegl86 | Putative dehydrogenase. | 50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.487 |
| AEA67558.1 | serC | PSEBR_a1368 | PSEBR_a1549 | Putative dehydrogenase. | Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.743 |
| AEA68671.1 | AEA66996.1 | PSEBR_a2391 | PSEBR_a830 | Putative peptide synthase. | Conserved hypothetical protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. | 0.438 |
page 1 of 3