STRINGSTRING
AEA67573.1 AEA67573.1 AEA67574.1 AEA67574.1 AEA67572.1 AEA67572.1 AEA67571.1 AEA67571.1 AEA68994.1 AEA68994.1 pxpA pxpA AEA67570.1 AEA67570.1 AEA67577.1 AEA67577.1 AEA67578.1 AEA67578.1 AEA67575.1 AEA67575.1 AEA70304.1 AEA70304.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67573.1Putative amidotransferase. (258 aa)    
Predicted Functional Partners:
AEA67574.1
Conserved hypothetical protein.
  
    0.820
AEA67572.1
Conserved hypothetical protein.
       0.695
AEA67571.1
Putative protease.
       0.549
AEA68994.1
Conserved hypothetical protein.
 
    0.482
pxpA
Conserved hypothetical protein, LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.430
AEA67570.1
Putative cyclic nucleotide-binding protein.
       0.428
AEA67577.1
Putative allophanate hydrolase subunit 1.
       0.428
AEA67578.1
Putative allophanate hydrolase subunit 2.
       0.426
AEA67575.1
Major facilitator transporter.
       0.417
AEA70304.1
Conserved hypothetical protein.
  
  
 0.417
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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