STRINGSTRING
AEA67591.1 AEA67591.1 AEA67590.1 AEA67590.1 AEA69000.1 AEA69000.1 AEA67589.1 AEA67589.1 AEA71168.1 AEA71168.1 AEA67592.1 AEA67592.1 AEA68999.1 AEA68999.1 AEA67385.1 AEA67385.1 AEA67527.1 AEA67527.1 AEA67872.1 AEA67872.1 AEA67889.1 AEA67889.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67591.1Conserved hypothetical protein. (78 aa)    
Predicted Functional Partners:
AEA67590.1
Putative ECF-family RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.877
AEA69000.1
Putative amine oxidoreductase.
  
  
 0.547
AEA67589.1
Putative acyltransferase.
       0.539
AEA71168.1
Conserved hypothetical protein.
     
 0.530
AEA67592.1
Porin O.
       0.459
AEA68999.1
Conserved hypothetical protein.
  
  
 0.410
AEA67385.1
Putative ECF sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.402
AEA67527.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.402
AEA67872.1
RNA polymerase sigma factor PvdS; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.402
AEA67889.1
Putative ECF sigma factor SigX; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
 0.402
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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