STRINGSTRING
AEA67608.1 AEA67608.1 AEA69883.1 AEA69883.1 AEA69884.1 AEA69884.1 AEA69853.1 AEA69853.1 AEA67428.1 AEA67428.1 AEA67426.1 AEA67426.1 AEA67609.1 AEA67609.1 AEA68536.1 AEA68536.1 AEA69554.1 AEA69554.1 AEA70332.1 AEA70332.1 AEA70341.1 AEA70341.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67608.1Conserved hypothetical protein. (243 aa)    
Predicted Functional Partners:
AEA69883.1
Conserved hypothetical protein.
 
     0.785
AEA69884.1
Conserved hypothetical protein.
 
     0.783
AEA69853.1
Conserved hypothetical protein.
 
     0.593
AEA67428.1
Putative Transcription factor, unclassified; Belongs to the sigma-70 factor family.
 
    0.552
AEA67426.1
Conserved hypothetical protein, DGPF domain-containing protein.
 
    0.539
AEA67609.1
Conserved hypothetical protein.
       0.504
AEA68536.1
Conserved hypothetical protein.
 
    0.492
AEA69554.1
Conserved hypothetical protein.
  
     0.485
AEA70332.1
Putative Transcription factor, TetR family.
  
     0.478
AEA70341.1
Putative Glyoxalase/Bleomycin resistance protein.
 
     0.444
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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