STRINGSTRING
AEA67646.1 AEA67646.1 AEA67012.1 AEA67012.1 AEA67645.1 AEA67645.1 gcvP gcvP AEA67650.1 AEA67650.1 AEA67644.1 AEA67644.1 AEA67647.1 AEA67647.1 AEA67648.1 AEA67648.1 AEA67649.1 AEA67649.1 AEA67651.1 AEA67651.1 AEA67652.1 AEA67652.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67646.1Transcriptional regulator. (520 aa)    
Predicted Functional Partners:
AEA67012.1
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
   
 0.772
AEA67645.1
Phenylalanine 4-monooxygenase (phenylalanine-4-hydroxylase).
     
 0.540
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
     
 0.495
AEA67650.1
Putative acyltransferase.
       0.462
AEA67644.1
4a-hydroxytetrahydrobiopterin dehydratase (pterin-4-alpha-carbinolamine dehydratase).
     
 0.452
AEA67647.1
Putative transaminase (aminotransferase); Belongs to the DegT/DnrJ/EryC1 family.
       0.451
AEA67648.1
Conserved hypothetical protein.
       0.451
AEA67649.1
Hypothetical protein.
       0.451
AEA67651.1
Conserved hypothetical protein.
       0.451
AEA67652.1
Putative methyltransferase.
       0.451
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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