Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA67658.1 | AEA67673.1 | PSEBR_a1463 | PSEBR_a1478 | Peptidoglycan hydrolase. | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.995 |
AEA67658.1 | AEA67674.1 | PSEBR_a1463 | PSEBR_a1479 | Peptidoglycan hydrolase. | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.995 |
AEA67658.1 | AEA67675.1 | PSEBR_a1463 | PSEBR_a1480 | Peptidoglycan hydrolase. | Flagellar assembly protein. | 0.989 |
AEA67658.1 | AEA67676.1 | PSEBR_a1463 | PSEBR_a1481 | Peptidoglycan hydrolase. | Flagellum-specific ATP synthase. | 0.908 |
AEA67658.1 | AEA67677.1 | PSEBR_a1463 | PSEBR_a1482 | Peptidoglycan hydrolase. | Flagellar biosynthesis chaperone. | 0.969 |
AEA67658.1 | AEA67681.1 | PSEBR_a1463 | PSEBR_a1486 | Peptidoglycan hydrolase. | Putative flagellar hook-length control protein (FliK). | 0.994 |
AEA67658.1 | AEA67683.1 | PSEBR_a1463 | PSEBR_a1488 | Peptidoglycan hydrolase. | Flagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.996 |
AEA67658.1 | AEA67685.1 | PSEBR_a1463 | PSEBR_a1490 | Peptidoglycan hydrolase. | Flagellar protein. | 0.993 |
AEA67658.1 | AEA70696.1 | PSEBR_a1463 | PSEBR_a4287 | Peptidoglycan hydrolase. | Putative flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.999 |
AEA67658.1 | fliE | PSEBR_a1463 | PSEBR_a1477 | Peptidoglycan hydrolase. | Flagellar hook-basal body protein. | 0.988 |
AEA67673.1 | AEA67658.1 | PSEBR_a1478 | PSEBR_a1463 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Peptidoglycan hydrolase. | 0.995 |
AEA67673.1 | AEA67674.1 | PSEBR_a1478 | PSEBR_a1479 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.997 |
AEA67673.1 | AEA67675.1 | PSEBR_a1478 | PSEBR_a1480 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar assembly protein. | 0.991 |
AEA67673.1 | AEA67676.1 | PSEBR_a1478 | PSEBR_a1481 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellum-specific ATP synthase. | 0.987 |
AEA67673.1 | AEA67677.1 | PSEBR_a1478 | PSEBR_a1482 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar biosynthesis chaperone. | 0.984 |
AEA67673.1 | AEA67681.1 | PSEBR_a1478 | PSEBR_a1486 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative flagellar hook-length control protein (FliK). | 0.960 |
AEA67673.1 | AEA67683.1 | PSEBR_a1478 | PSEBR_a1488 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar motor switch protein; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.980 |
AEA67673.1 | AEA67685.1 | PSEBR_a1478 | PSEBR_a1490 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar protein. | 0.963 |
AEA67673.1 | AEA70696.1 | PSEBR_a1478 | PSEBR_a4287 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative flagellar basal-body rod protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.984 |
AEA67673.1 | fliE | PSEBR_a1478 | PSEBR_a1477 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar hook-basal body protein. | 0.995 |
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