Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA67658.1 | AEA67673.1 | PSEBR_a1463 | PSEBR_a1478 | Peptidoglycan hydrolase. | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | 0.995 |
AEA67658.1 | AEA67674.1 | PSEBR_a1463 | PSEBR_a1479 | Peptidoglycan hydrolase. | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.995 |
AEA67658.1 | AEA67675.1 | PSEBR_a1463 | PSEBR_a1480 | Peptidoglycan hydrolase. | Flagellar assembly protein. | 0.989 |
AEA67658.1 | AEA67678.1 | PSEBR_a1463 | PSEBR_a1483 | Peptidoglycan hydrolase. | Putative anit sigma factor antagonist. | 0.826 |
AEA67658.1 | AEA67679.1 | PSEBR_a1463 | PSEBR_a1484 | Peptidoglycan hydrolase. | Putative histidine kinase. | 0.875 |
AEA67658.1 | AEA67680.1 | PSEBR_a1463 | PSEBR_a1485 | Peptidoglycan hydrolase. | Putative Phosphotransfer protein. | 0.655 |
AEA67658.1 | AEA69389.1 | PSEBR_a1463 | PSEBR_a3082 | Peptidoglycan hydrolase. | Putative Histidine kinase, Hybrid. | 0.421 |
AEA67658.1 | AEA70295.1 | PSEBR_a1463 | PSEBR_a3905 | Peptidoglycan hydrolase. | Putative Histidine kinase, Unorthodox. | 0.838 |
AEA67658.1 | AEA70670.1 | PSEBR_a1463 | PSEBR_a4261 | Peptidoglycan hydrolase. | Two-component system, sensor kinase GacS. | 0.835 |
AEA67658.1 | AEA70700.1 | PSEBR_a1463 | PSEBR_a4291 | Peptidoglycan hydrolase. | Putative negative regulator of flagellin synthesis. | 0.906 |
AEA67673.1 | AEA67658.1 | PSEBR_a1478 | PSEBR_a1463 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Peptidoglycan hydrolase. | 0.995 |
AEA67673.1 | AEA67674.1 | PSEBR_a1478 | PSEBR_a1479 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar motor switch protein; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. | 0.997 |
AEA67673.1 | AEA67675.1 | PSEBR_a1478 | PSEBR_a1480 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Flagellar assembly protein. | 0.991 |
AEA67673.1 | AEA67678.1 | PSEBR_a1478 | PSEBR_a1483 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative anit sigma factor antagonist. | 0.819 |
AEA67673.1 | AEA67679.1 | PSEBR_a1478 | PSEBR_a1484 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative histidine kinase. | 0.734 |
AEA67673.1 | AEA67680.1 | PSEBR_a1478 | PSEBR_a1485 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative Phosphotransfer protein. | 0.671 |
AEA67673.1 | AEA69389.1 | PSEBR_a1478 | PSEBR_a3082 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative Histidine kinase, Hybrid. | 0.645 |
AEA67673.1 | AEA70295.1 | PSEBR_a1478 | PSEBR_a3905 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative Histidine kinase, Unorthodox. | 0.707 |
AEA67673.1 | AEA70670.1 | PSEBR_a1478 | PSEBR_a4261 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Two-component system, sensor kinase GacS. | 0.685 |
AEA67673.1 | AEA70700.1 | PSEBR_a1478 | PSEBR_a4291 | Flagellar MS-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family. | Putative negative regulator of flagellin synthesis. | 0.704 |
page 1 of 5