STRINGSTRING
AEA67732.1 AEA67732.1 AEA67733.1 AEA67733.1 AEA66672.1 AEA66672.1 AEA67794.1 AEA67794.1 AEA71465.1 AEA71465.1 AEA71010.1 AEA71010.1 AEA67340.1 AEA67340.1 AEA71787.1 AEA71787.1 AEA70711.1 AEA70711.1 fumC fumC AEA71007.1 AEA71007.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67732.1Conserved hypothetical protein. (175 aa)    
Predicted Functional Partners:
AEA67733.1
Morphogene protein; Belongs to the BolA/IbaG family.
  
    0.881
AEA66672.1
Conserved hypothetical protein.
  
     0.746
AEA67794.1
Conserved hypothetical protein.
  
     0.674
AEA71465.1
Conserved hypothetical protein.
  
     0.648
AEA71010.1
Putative alginate biosynthesis protein.
  
     0.643
AEA67340.1
Conserved hypothetical protein.
  
     0.614
AEA71787.1
Putative flavin-containing amine oxidoreductase.
  
     0.590
AEA70711.1
Putative DNA-binding protein.
  
   
 0.587
fumC
Fumarate hydratase (fumarate hydratase Class II); Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
       0.580
AEA71007.1
Putative alginate biosynthesis protein AlgK.
  
     0.574
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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