STRINGSTRING
AEA67739.1 AEA67739.1 AEA70043.1 AEA70043.1 AEA68442.1 AEA68442.1 AEA69732.1 AEA69732.1 AEA66336.1 AEA66336.1 PSEBR_a47 PSEBR_a47 AEA68532.1 AEA68532.1 AEA70924.1 AEA70924.1 AEA71749.1 AEA71749.1 AEA66625.1 AEA66625.1 AEA68011.1 AEA68011.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67739.1Putative sensory box GGDEF domain-containing protein. (308 aa)    
Predicted Functional Partners:
AEA70043.1
Putative Response regulator, NarL family.
 
 
  
 0.903
AEA68442.1
Putative c-di-GMP phosphodiesterase.
  
 0.832
AEA69732.1
Putative c-di-GMP phosphodiesterase.
  
 0.828
AEA66336.1
Putative diguanylate cyclase/phosphodiesterase.
 
  
 0.806
PSEBR_a47
Putative c-di-GMP phosphodiesterase.
 
   
 0.780
AEA68532.1
Putative response regulator, RpfG family.
 
  
 0.774
AEA70924.1
Putative response regulator, PleD/VieA family.
 
 
0.616
AEA71749.1
Putative response regulator, PleD/VieA family.
 
 
0.579
AEA66625.1
Putative diguanylate cyclase/phosphodiesterase.
 
 
0.558
AEA68011.1
Putative diguanylate cyclase/phosphodiesterase.
 
 
0.554
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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