STRINGSTRING
AEA67777.1 AEA67777.1 AEA70472.1 AEA70472.1 AEA69536.1 AEA69536.1 AEA71246.1 AEA71246.1 AEA70498.1 AEA70498.1 AEA71247.1 AEA71247.1 AEA69783.1 AEA69783.1 queF queF AEA67776.1 AEA67776.1 PSEBR_a72 PSEBR_a72 AEA69542.1 AEA69542.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA67777.1Conserved hypothetical protein. (111 aa)    
Predicted Functional Partners:
AEA70472.1
Competence protein.
  
  
 0.709
AEA69536.1
Putative type II secretion system protein F.
  
  
 0.662
AEA71246.1
Type 4 fimbrial assembly protein.
  
  
 0.662
AEA70498.1
Hypothetical protein; putative membrane protein.
   
  
 0.614
AEA71247.1
Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
   
  
 0.614
AEA69783.1
Conserved hypothetical protein.
   
  
 0.557
queF
PreQ(1) synthase (7-cyano-7-deazaguanine reductase); Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).
     
 0.556
AEA67776.1
Nucleotide sugar epimerase/dehydratase WbpM.
       0.552
PSEBR_a72
Conserved hypothetical protein.
 
  
 0.540
AEA69542.1
Putative type II secretion pathway protein G precursor, putative pseudopilin.
  
  
 0.537
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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