STRINGSTRING
AEA67890.1 AEA67890.1 tolB tolB AEA67248.1 AEA67248.1 AEA67889.1 AEA67889.1 AEA67888.1 AEA67888.1 AEA67396.1 AEA67396.1 AEA68289.1 AEA68289.1 AEA67141.1 AEA67141.1 AEA68648.1 AEA68648.1 AEA67124.1 AEA67124.1 AEA67935.1 AEA67935.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AEA67890.1Outer membrane porin F. (344 aa)    
Predicted Functional Partners:
tolB
Colicin import protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 
 0.798
AEA67248.1
Putative outer membrane chaperone Skp; putative exported protein.
 
 
 0.701
AEA67889.1
Putative ECF sigma factor SigX; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.675
AEA67888.1
Conserved hypothetical protein.
 
   
 0.671
AEA67396.1
Porin B.
     
 0.650
AEA68289.1
Porin B.
     
 0.650
AEA67141.1
Putative porin B precursor.
     
 0.650
AEA68648.1
Sucrose porin.
     
 0.643
AEA67124.1
Putative maltoporin; putative exported membrane protein.
     
 0.643
AEA67935.1
Putative cytochrome-c oxidase, subunit II.
  
 
 0.623
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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