Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA68041.1 | AEA68042.1 | PSEBR_a1824 | PSEBR_a1825 | Cytochrome B561. | Conserved hypothetical protein. | 0.497 |
AEA68041.1 | AEA69365.1 | PSEBR_a1824 | PSEBR_a3058 | Cytochrome B561. | Putative cytochrome b561. | 0.764 |
AEA68041.1 | AEA71784.1 | PSEBR_a1824 | PSEBR_a5288 | Cytochrome B561. | Conserved hypothetical protein. | 0.436 |
AEA68041.1 | katG | PSEBR_a1824 | PSEBR_a710 | Cytochrome B561. | Bifunctional protein: catalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.431 |
AEA68041.1 | rimO | PSEBR_a1824 | PSEBR_a1136 | Cytochrome B561. | Conserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | 0.475 |
AEA68042.1 | AEA68041.1 | PSEBR_a1825 | PSEBR_a1824 | Conserved hypothetical protein. | Cytochrome B561. | 0.497 |
AEA69365.1 | AEA68041.1 | PSEBR_a3058 | PSEBR_a1824 | Putative cytochrome b561. | Cytochrome B561. | 0.764 |
AEA69365.1 | AEA71784.1 | PSEBR_a3058 | PSEBR_a5288 | Putative cytochrome b561. | Conserved hypothetical protein. | 0.457 |
AEA71784.1 | AEA68041.1 | PSEBR_a5288 | PSEBR_a1824 | Conserved hypothetical protein. | Cytochrome B561. | 0.436 |
AEA71784.1 | AEA69365.1 | PSEBR_a5288 | PSEBR_a3058 | Conserved hypothetical protein. | Putative cytochrome b561. | 0.457 |
katG | AEA68041.1 | PSEBR_a710 | PSEBR_a1824 | Bifunctional protein: catalase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | Cytochrome B561. | 0.431 |
rimO | AEA68041.1 | PSEBR_a1136 | PSEBR_a1824 | Conserved hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily. | Cytochrome B561. | 0.475 |