STRINGSTRING
AEA68077.1 AEA68077.1 AEA68078.1 AEA68078.1 AEA68075.1 AEA68075.1 AEA67505.1 AEA67505.1 AEA67506.1 AEA67506.1 AEA68076.1 AEA68076.1 AEA69885.1 AEA69885.1 AEA67337.1 AEA67337.1 AEA68873.1 AEA68873.1 AEA69213.1 AEA69213.1 AEA68671.1 AEA68671.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA68077.1Putative hydrolase. (214 aa)    
Predicted Functional Partners:
AEA68078.1
Putative transcription factor, RpiR family.
 
  
 0.927
AEA68075.1
Putative hydrolase.
  
  
 0.924
AEA67505.1
Allophanate hydrolase (urea-1-carboxylate amidohydrolase).
 
  
  0.915
AEA67506.1
Urea carboxylase (Allophanate hydrolase subunit 2).
     
  0.900
AEA68076.1
Putative glutamate--ammonia ligase (glutamine synthetase).
 
  
 0.856
AEA69885.1
Putative isochorismatase.
  
     0.757
AEA67337.1
Putative hydrolase, Cysteine hydrolases family.
  
     0.742
AEA68873.1
Putative isochorismatase family protein.
  
     0.742
AEA69213.1
Conserved hypothetical protein, containing Helix-turn-helix domain, rpiR family.
  
  
 0.641
AEA68671.1
Putative peptide synthase.
  
 
 0.486
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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