Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AEA67254.1 | AEA70445.1 | PSEBR_a1080 | PSEBR_a4045 | DNA polymerase III alpha subunit. | DNA polymerase III, subunit delta. | 0.979 |
| AEA67254.1 | AEA71346.1 | PSEBR_a1080 | PSEBR_a4924 | DNA polymerase III alpha subunit. | Putative exonuclease. | 0.960 |
| AEA67254.1 | AEA71375.1 | PSEBR_a1080 | PSEBR_a4953 | DNA polymerase III alpha subunit. | Putative DNA polymerase III, delta subunit. | 0.978 |
| AEA67254.1 | PSEBR_a2 | PSEBR_a1080 | PSEBR_a2 | DNA polymerase III alpha subunit. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.984 |
| AEA67254.1 | dnaA | PSEBR_a1080 | PSEBR_a1 | DNA polymerase III alpha subunit. | Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.683 |
| AEA67254.1 | dnaQ | PSEBR_a1080 | PSEBR_a3283 | DNA polymerase III alpha subunit. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.976 |
| AEA67254.1 | dnaX | PSEBR_a1080 | PSEBR_a1712 | DNA polymerase III alpha subunit. | DNA-directed DNA polymerase (DNA polymerase III, tau subunit); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.983 |
| AEA67254.1 | polA | PSEBR_a1080 | PSEBR_a40 | DNA polymerase III alpha subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.687 |
| AEA68105.1 | AEA70445.1 | PSEBR_a1885 | PSEBR_a4045 | DNA-directed DNA polymerase (DNA polymerase II). | DNA polymerase III, subunit delta. | 0.907 |
| AEA68105.1 | PSEBR_a2 | PSEBR_a1885 | PSEBR_a2 | DNA-directed DNA polymerase (DNA polymerase II). | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.978 |
| AEA68105.1 | polA | PSEBR_a1885 | PSEBR_a40 | DNA-directed DNA polymerase (DNA polymerase II). | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.975 |
| AEA70445.1 | AEA67254.1 | PSEBR_a4045 | PSEBR_a1080 | DNA polymerase III, subunit delta. | DNA polymerase III alpha subunit. | 0.979 |
| AEA70445.1 | AEA68105.1 | PSEBR_a4045 | PSEBR_a1885 | DNA polymerase III, subunit delta. | DNA-directed DNA polymerase (DNA polymerase II). | 0.907 |
| AEA70445.1 | AEA70658.1 | PSEBR_a4045 | PSEBR_a4250 | DNA polymerase III, subunit delta. | Putative DNA replication initiation factor; Belongs to the DnaA family. HdA subfamily. | 0.404 |
| AEA70445.1 | AEA71346.1 | PSEBR_a4045 | PSEBR_a4924 | DNA polymerase III, subunit delta. | Putative exonuclease. | 0.923 |
| AEA70445.1 | AEA71375.1 | PSEBR_a4045 | PSEBR_a4953 | DNA polymerase III, subunit delta. | Putative DNA polymerase III, delta subunit. | 0.987 |
| AEA70445.1 | PSEBR_a2 | PSEBR_a4045 | PSEBR_a2 | DNA polymerase III, subunit delta. | DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
| AEA70445.1 | dnaQ | PSEBR_a4045 | PSEBR_a3283 | DNA polymerase III, subunit delta. | DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. | 0.926 |
| AEA70445.1 | dnaX | PSEBR_a4045 | PSEBR_a1712 | DNA polymerase III, subunit delta. | DNA-directed DNA polymerase (DNA polymerase III, tau subunit); DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.991 |
| AEA70445.1 | polA | PSEBR_a4045 | PSEBR_a40 | DNA polymerase III, subunit delta. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.940 |
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