STRINGSTRING
AEA66335.1 AEA66335.1 AEA66336.1 AEA66336.1 AEA66341.1 AEA66341.1 AEA67625.1 AEA67625.1 AEA67626.1 AEA67626.1 AEA66340.1 AEA66340.1 AEA67624.1 AEA67624.1 AEA66342.1 AEA66342.1 AEA66338.1 AEA66338.1 AEA70924.1 AEA70924.1 AEA70616.1 AEA70616.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA66335.1Putative periplasmic protease. (220 aa)    
Predicted Functional Partners:
AEA66336.1
Putative diguanylate cyclase/phosphodiesterase.
 
 
 0.967
AEA66341.1
ATP binding cassette protein component of ABC transporter required for LapA secretion.
 
  
 0.829
AEA67625.1
Putative ABC transporter, ATP-binding/permease components.
 
  
 0.827
AEA67626.1
Putative type I secretion outer membrane protein, TolC family.
 
   
 0.817
AEA66340.1
Outer membrane component of ABC transporter required for LapA secretion.
 
   
 0.814
AEA67624.1
Putative type I secretion membrane fusion protein, HlyD family.
 
  
 0.795
AEA66342.1
HylD like membrane fusion protein component of ABC transporter required for LapA secretion.
 
  
 0.792
AEA66338.1
Conserved hypothetical protein.
 
     0.762
AEA70924.1
Putative response regulator, PleD/VieA family.
   
 
 0.609
AEA70616.1
Putative diguanylate cyclase/phosphodiesterase.
 
 
 
 0.577
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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