Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA66430.1 | AEA68290.1 | PSEBR_a294 | PSEBR_a2044 | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Putative citrate utilization protein B. | 0.855 |
AEA66430.1 | AEA68346.1 | PSEBR_a294 | PSEBR_a2088 | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Cytochrome c-type protein. | 0.743 |
AEA66430.1 | AEA68347.1 | PSEBR_a294 | PSEBR_a2089 | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Diheme cytochrome c; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.912 |
AEA66430.1 | AEA68358.1 | PSEBR_a294 | PSEBR_a2098 | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Regulatory protein. | 0.490 |
AEA66430.1 | AEA68935.1 | PSEBR_a294 | PSEBR_a2643 | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Regulatory protein. | 0.490 |
AEA66430.1 | napD | PSEBR_a294 | PSEBR_a2091 | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | Nitrate reductase accessory protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.930 |
AEA68290.1 | AEA66430.1 | PSEBR_a2044 | PSEBR_a294 | Putative citrate utilization protein B. | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.855 |
AEA68290.1 | AEA68346.1 | PSEBR_a2044 | PSEBR_a2088 | Putative citrate utilization protein B. | Cytochrome c-type protein. | 0.642 |
AEA68290.1 | AEA68347.1 | PSEBR_a2044 | PSEBR_a2089 | Putative citrate utilization protein B. | Diheme cytochrome c; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.681 |
AEA68290.1 | AEA68358.1 | PSEBR_a2044 | PSEBR_a2098 | Putative citrate utilization protein B. | Regulatory protein. | 0.566 |
AEA68290.1 | AEA68935.1 | PSEBR_a2044 | PSEBR_a2643 | Putative citrate utilization protein B. | Regulatory protein. | 0.566 |
AEA68290.1 | AEA70807.1 | PSEBR_a2044 | PSEBR_a4398 | Putative citrate utilization protein B. | Putative oxidoreductase. | 0.855 |
AEA68290.1 | napA | PSEBR_a2044 | PSEBR_a2090 | Putative citrate utilization protein B. | Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite. | 0.855 |
AEA68290.1 | napD | PSEBR_a2044 | PSEBR_a2091 | Putative citrate utilization protein B. | Nitrate reductase accessory protein; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export. | 0.659 |
AEA68346.1 | AEA66430.1 | PSEBR_a2088 | PSEBR_a294 | Cytochrome c-type protein. | Putative molybdopterin-binding oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. | 0.743 |
AEA68346.1 | AEA68290.1 | PSEBR_a2088 | PSEBR_a2044 | Cytochrome c-type protein. | Putative citrate utilization protein B. | 0.642 |
AEA68346.1 | AEA68347.1 | PSEBR_a2088 | PSEBR_a2089 | Cytochrome c-type protein. | Diheme cytochrome c; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family. | 0.995 |
AEA68346.1 | AEA68350.1 | PSEBR_a2088 | PSEBR_a2092 | Cytochrome c-type protein. | Nitrate reductase accessory protein. | 0.951 |
AEA68346.1 | AEA68358.1 | PSEBR_a2088 | PSEBR_a2098 | Cytochrome c-type protein. | Regulatory protein. | 0.532 |
AEA68346.1 | AEA68935.1 | PSEBR_a2088 | PSEBR_a2643 | Cytochrome c-type protein. | Regulatory protein. | 0.534 |
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