STRINGSTRING
AEA68440.1 AEA68440.1 AEA68439.1 AEA68439.1 macB macB AEA67405.1 AEA67405.1 AEA71022.1 AEA71022.1 AEA68916.1 AEA68916.1 AEA71023.1 AEA71023.1 AEA70074.1 AEA70074.1 AEA69102.1 AEA69102.1 AEA68915.1 AEA68915.1 AEA69995.1 AEA69995.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEA68440.1Conserved hypothetical protein. (288 aa)    
Predicted Functional Partners:
AEA68439.1
Conserved hypothetical protein.
 
  
 0.883
macB
Macrolide ABC transporter, ATP-binding/permease components; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
  
 
 0.808
AEA67405.1
Putative fusaric acid resistance domain-containing protein; putative membrane protein.
 
  
 0.796
AEA71022.1
Putative fusaric acid resistance protein fusion.
 
  
 0.702
AEA68916.1
Putative outer membrane protein precursor.
 
 
 0.545
AEA71023.1
Putative fusaric acid resistance protein.
 
 
 0.542
AEA70074.1
Putative efflux protein; outer membrane lipoprotein.
 
 
 0.540
AEA69102.1
Putative outer membrane efflux protein.
 
 
 0.537
AEA68915.1
Putative multidrug efflux MFS transporter.
  
 
 0.534
AEA69995.1
Putative transporter, outer membrane lipoprotein.
 
 
 0.524
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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