STRINGSTRING
AEA68640.1 AEA68640.1 AEA69003.1 AEA69003.1 AEA68639.1 AEA68639.1 AEA68641.1 AEA68641.1 AEA68638.1 AEA68638.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
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[Homology]
Score
AEA68640.1Putative oxidoreductase. (364 aa)    
Predicted Functional Partners:
AEA69003.1
Putative oxidoreductase.
  
  
 
0.903
AEA68639.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.597
AEA68641.1
Putative transcription factor, TetR family.
  
  
 0.553
AEA68638.1
Putative oxidoreductase.
 
  
 0.506
Your Current Organism:
Pseudomonas brassicacearum
NCBI taxonomy Id: 994484
Other names: P. brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum CFBP 11874, Pseudomonas brassicacearum subsp. brassicacearum NFM421, Pseudomonas brassicacearum subsp. brassicacearum str. NFM421, Pseudomonas brassicacearum subsp. brassicacearum strain NFM421
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