Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AEA67170.1 | AEA69340.1 | PSEBR_a997 | PSEBR_a3035 | Threonine synthase. | Putative threonine synthase. | 0.906 |
AEA67170.1 | AEA71108.1 | PSEBR_a997 | PSEBR_a4690 | Threonine synthase. | Putative threonine synthase. | 0.900 |
AEA67170.1 | AEA71212.1 | PSEBR_a997 | PSEBR_a4793 | Threonine synthase. | Acetolactate synthase small subunit. | 0.422 |
AEA67170.1 | AEA71427.1 | PSEBR_a997 | PSEBR_a4999 | Threonine synthase. | Threonine synthase. | 0.905 |
AEA67170.1 | ilvA | PSEBR_a997 | PSEBR_a249 | Threonine synthase. | Threonine ammonia-lyase (Threonine dehydratase); Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.933 |
AEA67170.1 | leuB | PSEBR_a997 | PSEBR_a3865 | Threonine synthase. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.407 |
AEA68622.1 | AEA70914.1 | PSEBR_a2343 | PSEBR_a4502 | Putative acetolactate synthase. | Conserved hypothetical protein; Belongs to the TPP enzyme family. | 0.930 |
AEA68622.1 | AEA71212.1 | PSEBR_a2343 | PSEBR_a4793 | Putative acetolactate synthase. | Acetolactate synthase small subunit. | 0.982 |
AEA68622.1 | AEA71213.1 | PSEBR_a2343 | PSEBR_a4794 | Putative acetolactate synthase. | Acetolactate synthase large subunit. | 0.919 |
AEA68622.1 | ilvA | PSEBR_a2343 | PSEBR_a249 | Putative acetolactate synthase. | Threonine ammonia-lyase (Threonine dehydratase); Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.924 |
AEA68622.1 | leuB | PSEBR_a2343 | PSEBR_a3865 | Putative acetolactate synthase. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.937 |
AEA69340.1 | AEA67170.1 | PSEBR_a3035 | PSEBR_a997 | Putative threonine synthase. | Threonine synthase. | 0.906 |
AEA69340.1 | AEA71108.1 | PSEBR_a3035 | PSEBR_a4690 | Putative threonine synthase. | Putative threonine synthase. | 0.900 |
AEA69340.1 | AEA71212.1 | PSEBR_a3035 | PSEBR_a4793 | Putative threonine synthase. | Acetolactate synthase small subunit. | 0.422 |
AEA69340.1 | AEA71427.1 | PSEBR_a3035 | PSEBR_a4999 | Putative threonine synthase. | Threonine synthase. | 0.909 |
AEA69340.1 | ilvA | PSEBR_a3035 | PSEBR_a249 | Putative threonine synthase. | Threonine ammonia-lyase (Threonine dehydratase); Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.933 |
AEA69340.1 | leuB | PSEBR_a3035 | PSEBR_a3865 | Putative threonine synthase. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.412 |
AEA70914.1 | AEA68622.1 | PSEBR_a4502 | PSEBR_a2343 | Conserved hypothetical protein; Belongs to the TPP enzyme family. | Putative acetolactate synthase. | 0.930 |
AEA70914.1 | AEA71212.1 | PSEBR_a4502 | PSEBR_a4793 | Conserved hypothetical protein; Belongs to the TPP enzyme family. | Acetolactate synthase small subunit. | 0.990 |
AEA70914.1 | AEA71213.1 | PSEBR_a4502 | PSEBR_a4794 | Conserved hypothetical protein; Belongs to the TPP enzyme family. | Acetolactate synthase large subunit. | 0.925 |
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